Warning |
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ecflow v4 is no longer actively developed, only critical issues will be fixed. Please migrate to ecflow 5 at your earliest convenience |
Dependencies
- cmake ( install cmake (sudo apt-get install cmake))
- g++ ( install g++ (sudo apt-get install g++) )
- Python 2.7 ( or Python 3.0 not tested )
If you intend to use ecFlow Python API, You will need to install Python. (install python-dev (sudo apt-get install python-dev))
Please ensure that python is accessible on $PATH otherwise, you may need to customise $BOOST_ROOT/tools/build/v2/site-config.jam .
If you do not need the python api, then you can build without it, see below.The python installation should include the development packages
Xlib, X11, XMotif for ecflowview .
Do not use Lesstif library to compile ecflowview as a replacement for Motif.
OpenMotif can be downloaded from http://www.ist.co.uk/downloads/motif_download.html
If you do not want use the GUI, then you can configure the build to ignore this dependency.- Qt for ecFlowUI (Qt5 preferred).
For self-installed Qt libraries, consider setting CMAKE_PREFIX_PATH (see below). See also http://doc.qt.io/qt-5/cmake-manual.html for further details.
Setting up the build environment
ecfFlow ecFlow consists of two tar files i.e.:
boost_1_53_0.tar.gz
- ecFlow-4.117.0-Source.tar.gz
Create a directory for the build:
Code Block language bash mkdir /tmp/ecflow_build
Copy the the two tar file into this directory, then change directory to /tmp/ecflow_build
Un-zip then un-tar the two file files:
Code Block language bash tar -zxf boost_1_53_0.tar.gz tar -zxf ecFlow-4.117.0-Source.tar.gz
You should have two directories created:
Code Block boost_1_53_0 ecFlow-4.117.0-Source
Create two environment variables. These are used by some of the scripts:
Code Block export WK=/tmp/ecflow_build/ecFlow-4.
117.0-Source export BOOST_ROOT=/tmp/ecflow_build/boost_1_53_0
language | bash |
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If you have a module system, please ensure that before you start, gcc,cmake,python2,python3,etc are available in $PATH.
Code Block language bash module load gnu module load cmake module load python3 module load qt
Build boost
- Boost uses bjam for building the boost libs.bjam source is available in boost, hence we first need to build bjam itself:
Code Block language bash cd $BOOST_ROOT ./bootstrap.sh
- Ecflow uses some of compiled libraries in boost. The following script will build the required lib’s, in both debug and release forms and will configure boost build according to your platform.
For python3
Code Block ./bootstrap.sh --with-python=/path/to/python3
You may need to update $BOOST_ROOT/project-config.jam, with path to executable and path to include files.
Code Block # using python # : # version # : # cmd-or-prefix # : # includes # : # libraries # : # condition # ; using python : 3.6 : /usr/local/apps/python3/3.6.8-01/bin/python3 : /usr/local/apps/python3/3.6.8-01/include/python3.6m ; # remember to preserve the spaces, as they are significant
- IF you do not require the ecFlow python API, you can avoid building If you do not require the ecflow python api, you can avoid build boost python libs by setting. export
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export ECF_NO_PYTHON=1 |
ecFlow uses some of the compiled libraries in boost. The following script will build the required lib’s and configure boost build according to your platform
Code Block language bash title Build boost libraries including python3 used by ecflow. cd $BOOST_ROOT $WK/build_scripts/boost_1_53_fix.sh # fix for boost, only for some platforms $WK/build_scripts/boost_build.sh # compile boost libs used by ecFlow
...
. Please see notes in boost_build.sh, if you want to build both for python2 and python3
If you want to build python2 and python3. Then ALWAYS build the python3 first. See earlier steps
Code Block title Building boost python2 libs module load python mv $BOOST_ROOT/project-config.jam $BOOST_ROOT/project-config.jam_python3 # move the python3 config to the side ./bootstrap.sh # || ./bootstrap.sh --with-python=/path/to/python2 to regenerate project-config.jam ./b2 --with-python --clean # Clean previous python3 build *VERY* important $WK/build_scripts/boost_build.sh # Build boost python2 libs
Build
Build
There are two build systems available for ecflow:
- boost-build/bjam
- cmake/ecbuild
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cmake
As configure, CMake CMake will run some tests on the customer's system to find out if required third-party software libraries are available and notes note their locations (paths). Based on this information it will produces produce the Makefiles needed to compile and install ecflowecFlow
CMake is a cross-platform free software program for managing the build process of software using a compiler-independent method.
Generating the Makefiles with CMake
After changing into the build ecflow directory, the user user has to run CMake with his/her own options. The command gives feedback on what requirements are fulfilled and what software is still required. Table The table below gives an overview of the different options of configure. The default (without any options) will compile a share library only and install it in /usr/local/.
cmake options | doc | default |
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CMAKE_INSTALL_PREFIX | where you want to install your |
ecFlow | /usr/local | |
CMAKE_BUILD_TYPE | to select the type of compilation:
| Release |
CMAKE_CXX_FLAGS |
more flags for the C++ compiler |
ENABLE_SERVER | build the ecFlow server | on |
ENABLE_PYTHON | enable python interface | on |
PYTHON_EXECUTABLE | Pyhon3. Path to python3 executable. ONLY required if cmake version is less than 3.12.0 | |
ENABLE_UI | enable build of ecflowUI (requires |
Qt) | on |
CMAKE_PREFIX_PATH |
use to provide a path to |
See http://doc.qt.io/qt-5/cmake-manual.html for further details.
dependent libraries that are installed in non-system locations. | ||
ENABLE_GUI | enable the build of ecflowview (requires X11 and motif) | on |
ENABLE_ALL_TESTS | enable performance, migration, memory leak , and regression tests | off |
ENABLE_SSL | Encrypted communication for user commands (experimental, from ecFlow release 4.5.0). Please see: Open ssl for more details. | off |
ENABLE_SECURE_USER | password-based protection for user commands (experimental, from ecFlow release 4.5.0) Please see: Black list file (experimental) for more details. | off |
BOOST_ROOT | where to find boost ( if non-standard installation ) If not specified cmake will look for an environment variable |
of the same name. |
The C++ compilers are chosen by CMake. (This can be overwritten by setting the environment variables CXX on the command line before you call cmake, to the preferred compiler).
Further, the variable CMAKE_CXX_FLAGS can be used to set compiler flags for optimisation or debugging.
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cd $WK mkdir build; cd build; # Go with defaults, thiswill should build with CMAKE_BUILD_TYPE=Release and install to /usr/local cmake .. # build release with debug info # cmake .. -DCMAKE_BUILD_TYPE=RelWithDebInfo # Override install prefix, build the most optimised executables # cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local/apps/ecflow -DCMAKE_BUILD_TYPE=Release /4.14.0 # do notNOT build the gui. # cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local/apps/ecflow -DCMAKE_BUILD_TYPE=Release -DENABLE_GUI=OFF # If you ignore Wdeprecated-declarations compiler warning messages and do notNOT needbuild the python api, use: # cmake .. -DCMAKE_CXX_FLAGS="-Wno-deprecated-declarations" -DENABLE_PYTHON=OFF # Use -j option to speed up compilation. Determine number of cpu's CPUS=$(lscpu -p | grep -v '#' | wc -l) make -j${CPUS} make check make install |
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If you experience problem with your installation, and need to fix your install of dependent libraries like QT,Python,Boost,gcc etc, then it is VERY important that you delete the build directory and start cmake build again. (This is because cmake keeps a cache of your configuration, and re-uses this unless the build directory is deleted).
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To use the ecFlow Python Api , you need to add/change PYTHONPATH .
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export PYTHONPATH=$PYTHONPATH:<prefix>/4.17.0.9/lib/python2.7/site-packages/ecflow # If you used the default's then <prefix>=/usr/local # otherwise you should use whatever you entered for -DCMAKE_INSTALL_PREFIX, hence in the examples above we would have: export PYTHONPATH=$PYTHONPATH:/usr/local/apps/ecflow/4.17.0.9/lib/python2.7/site-packages/ecflow |
boost-build/bjam
- Now make sure bjam is accessible from $PATH or use $BOOST_ROOT/bjam in place bjam below.
- For installation the following environment variables are required.
ECFLOW_INSTALL_DIR # Directory Location for client ,server and gui program's ECFLOW_PYTHON_INSTALL_DIR # Directory Location for ecflow python package
The python installation can be customised, by changing Pyext/jamfile.jam and $BOOST_ROOT/tools/build/v2/site-config.jam
- To disable ecflow python api. "export ECF_NO_PYTHON=1"
We now need to build ecFlow. Currently ecflowview/GUI is only built if environment variable of name ARCH is set to linux:
Code Block language bash cd $WK bjam variant=release
On some systems like fedora/redhat you may run into compiler errors which complain about the template depth being exceeded. In this case compile using:Code Block language bash cd $WK bjam c++-template-depth=512 variant=release # using boost 1.53 with gcc 4.8, will have excessive warnings. To prune these warnings use bjam c++-template-depth=512 cxxflags=-Wno-unused-local-typedefs variant=release
If you have a multi-core machine, you can speed up the build using, the -j<n> option. Where ‘n’ is an integer, of the number of cores.Code Block language applescript CPUS=$(lscpu -p | grep -v '#' | wc -l) bjam variant=release -j${CPUS)
- Once ecFlow is built it can be installed. NOTE, if you used c++-template-depth=512 || cxxflags=-Wno-unused-local-typedefs, use it again for the next step.
Code Block language bash bjam variant=release install-all
This will create directories:
Code Block <ECFLOW_INSTALL_DIR>/bin <ECFLOW_INSTALL_DIR>/lib <ECFLOW_INSTALL_DIR>/doc <ECFLOW_INSTALL_DIR>/share <ECFLOW_PYTHON_INSTALL_DIR>
Depending on your umask setting you may need to call chmod 755 on the executables
Code Block language bash export PYTHONPATH=$PYTHONPATH:$ECFLOW_PYTHON_INSTALL_DIR
- When compiling ecflowview in a system where motif is not installed in the usual location, or where both motif and lesstif are installed, it is possible to export the environment variables MOTIF_INCLUDE and MOTIF_LIBRARY to help bjam to find the right location for include files and libraries. Openmotif may be retrieve from IST server and installed locally: wget http://www.ist-inc.com/motif/download/motif_files/openmotif-2.1.32-2_IST.x86_64.rpm rpm2cpio openmotif-2.1.32-2_IST.x86_64.rpm | cpio -idmv
user shall then compile setting MOTIF_INCLUDE and MOTIF_LIBRARY variable.
ecflowview
By default the ecflowview 'server' and ‘ecflowview.menu’ files are placed in <ECFLOW_INSTALL_DIR>/share/ecflow directory. However you can use ECFLOWVIEW_HOME shell variable to override this.
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Code Block |
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<server_name> <machine_name> <port> |
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Installing ecFlow Python to a custom directory
The default install for ecFlow will install python(if it was enabled) under the directory given to CMAKE_INSTALL_PREFIX.
However, sometimes we may need to install the ecFlow python module to a different prefix. (starting with release 4.3.0)
This can be done using:
Code Block |
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cd $WK/build # change to the build directory
cmake -DCMAKE_INSTALL_PREFIX=/tmp/avi/custom/ecflow/4.17.0 -DCOMPONENT=python -P cmake_install.cmake -- make install # install python module under /tmp/avi/custom/ecflow/4.17.0 |
ecflow_ui: Make a list servers accessible to all users
The GUI used by ecFlow is called ecflow_ui. This is used to interact and visualize the ecFlow servers.
You can make the list of servers available for your users by:
- creating a file called servers
The format of the server's file is very easy:
Code Block title server file format <server_name> <machine_name> <port>
An example might be:
Code Block title servers file server machineX 3141 projectX machineabc 4141 exp1 machineabc 4141 mars bigmac 11031
Copy this file to CMAKE_INSTALL_PREFIX/share/ecflow/. This makes the list of servers accessible to all users of ecflow_ui
Code Block cp servers /tmp/avi/custom/ecflow/4.17.0/share/ecflow/.
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